MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella sp.
GH3.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 258
bases: 1,562,805 bps
CDS: 1,434
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 41
misc RNA:
Total features: 1,482
Total number of protein coding genes annotated/found:
1,434
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5009|JADGKK010000102.1
SEQF5009_01452
Genome Viewer
NA
AA
555/185
12573-12019
Signal peptidase IB
SEQF5009|JADGKK010000102.1
SEQF5009_01453
Genome Viewer
NA
AA
855/285
13507-12653
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01454
Genome Viewer
NA
AA
1035/345
14617-13583
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01455
Genome Viewer
NA
AA
612/204
15297-14686
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01456
Genome Viewer
NA
AA
1464/488
16838-15375
DEAD-box ATP-dependent RNA helicase CshA
SEQF5009|JADGKK010000102.1
SEQF5009_01457
Genome Viewer
NA
AA
615/205
17757-17143
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01458
Genome Viewer
NA
AA
1344/448
19401-18058
Multidrug resistance protein NorM
SEQF5009|JADGKK010000102.1
SEQF5009_01459
Genome Viewer
NA
AA
774/258
20630-19857
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01460
Genome Viewer
NA
AA
735/245
21559-20825
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01461
Genome Viewer
NA
AA
843/281
22404-21562
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01462
Genome Viewer
NA
AA
1323/441
23874-22552
Branched-chain amino acid transport system 2 carrier protein
SEQF5009|JADGKK010000102.1
SEQF5009_01463
Genome Viewer
NA
AA
2049/683
26199-24151
DNA topoisomerase 1
SEQF5009|JADGKK010000102.1
SEQF5009_01464
Genome Viewer
NA
AA
762/254
27028-26267
Methionine aminopeptidase
SEQF5009|JADGKK010000102.1
SEQF5009_01465
Genome Viewer
NA
AA
768/256
27842-27075
Acid sugar phosphatase
SEQF5009|JADGKK010000102.1
SEQF5009_01466
Genome Viewer
NA
AA
1227/409
29174-27948
Peptidase T
SEQF5009|JADGKK010000102.1
SEQF5009_01467
Genome Viewer
NA
AA
486/162
29681-29196
hypothetical protein
SEQF5009|JADGKK010000102.1
SEQF5009_01468
Genome Viewer
NA
AA
1719/573
31495-29777
Phosphoglucomutase
SEQF5009|JADGKK010000102.1
SEQF5009_01469
Genome Viewer
NA
AA
711/237
32230-31520
Purine nucleoside phosphorylase DeoD-type
SEQF5009|JADGKK010000102.1
SEQF5009_01470
Genome Viewer
NA
AA
2358/786
32485-34842
Na(+)/H(+) antiporter subunit A
SEQF5009|JADGKK010000102.1
SEQF5009_01471
Genome Viewer
NA
AA
426/142
34832-35257
Na(+)/H(+) antiporter subunit B
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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